Ureaplasma Gene Record
Ureaplasma urealyticum
Gene Record for: UU027
Locus Name:
UU027
Gene:
ABC sbp
Molecule:
p
Start:
28999
Finish:
28028
Nucleotide Length:
972
Protein Length:
323
Frame:
-3
Molecular Weight:
37,097
pI:
10.06
Description:
putative ABC substrate-binding protein - iron
Role:Subrole:
Transport and binding proteins : Cations
Protein Analysis
Peptide Information:
Select
Hydrophobicity Plot:
Select
Prosite Motifs:
1.
Prokaryotic membrane lipoprotein lipid attachment site
Coiled-coil Segments:
None
Secretory Signal Peptides:
Got One!
Genbank Protein Match:
No hits
Blast Summary
Full Blast Results
M. gen.
Protein Match:
none
Blast Summary
Full Blast Results
M. pneumoniae
Protein Match:
No hits
Blast Summary
Full Blast Results
Notes
There are two stopsin 4 codons at COOH end; no methionine in the ORF. Homology and register with the best hit, (M. pneumoniae gene) is weak. GTG and probable SD sequence define start. C =30 AA into gene suggests a signal sequence.
Protein Sequence
MNKKIKTVFI SSLIVGLLGL ITTSGVACSS SIKSKQENEI YPTIKGYDQH DFSKILASEF IKIIKTNIQF LAPNKDIKYE LYDARLNELD EDVIDLIIRY HFKGQTHTYK KILKGFKNAK QYRLFLENKK YLEDEKNHNT LYLMPIVNSS INISKTTVDE ALKWQNSYLN INNSNNDLKY EILKITKSKT ANSIDIEIKI SKGNGENLAS ITYNKTLNGF ISEADKKIYL ANLEAIKQDK NQLEPQLIDE KTKQKTIKEV IENYKTLFKL PFQTGFIYEI QSVEPDVNNK TAVVFKILIK KGNGSQEAVL EYLKTIKGFN QNK
Nucleotide Sequence
GTGAATAAAA AAATTAAAAC AGTTTTCATT AGTAGTTTAA TTGTTGGACT ATTAGGTTTG ATAACAACAA GTGGTGTTGC GTGCAGCTCA TCAATAAAAT CAAAACAAGA GAATGAAATT TATCCAACCA TTAAAGGTTA TGATCAACAT GATTTTTCAA AGATTTTAGC TTCAGAATTT ATTAAGATTA TTAAAACTAA TATTCAATTT TTGGCACCAA ATAAAGATAT TAAATATGAA TTATATGATG CACGATTGAA TGAGTTAGAT GAAGATGTAA TTGATCTAAT AATTCGTTAT CATTTTAAAG GTCAAACGCA CACTTACAAA AAAATCTTAA AAGGTTTTAA GAATGCTAAA CAATATCGTT TATTTTTAGA AAATAAAAAA TATTTAGAAG ATGAAAAAAA CCATAATACT CTTTATTTAA TGCCCATAGT TAATTCAAGT ATTAACATTA GTAAAACAAC AGTAGATGAA GCATTAAAAT GACAAAATAG TTATTTAAAT ATTAACAATA GTAATAATGA TTTAAAATAT GAAATTCTAA AAATTACTAA AAGTAAAACT GCTAATTCTA TTGATATCGA AATTAAAATC AGTAAAGGTA ATGGAGAAAA TTTAGCAAGC ATTACTTATA ACAAAACACT TAATGGTTTT ATTTCTGAAG CTGATAAAAA GATTTATTTA GCTAATTTAG AAGCGATTAA ACAAGATAAA AATCAACTTG AACCACAATT AATTGATGAA AAAACAAAAC AAAAAACAAT AAAAGAAGTT ATTGAAAATT ATAAAACATT ATTTAAATTA CCATTCCAAA CAGGTTTTAT TTATGAAATT CAAAGTGTTG AACCTGATGT TAATAACAAA ACAGCGGTGG TTTTTAAGAT TTTGATTAAA AAAGGCAATG GAAGTCAAGA AGCAGTTTTA GAATATTTAA AAACGATTAA AGGATTTAAT CAAAATAAAT AA