Ureaplasma Gene Record
Ureaplasma urealyticum
Gene Record for: UU087
Locus Name:
UU087
Gene:
dnaX
Molecule:
p
Start:
105760
Finish:
107553
Nucleotide Length:
1794
Protein Length:
597
Frame:
1
Molecular Weight:
69,038
pI:
6.32
Description:
DNA polymerase III gamma-tau subunits
Role:Subrole:
Replication : DNA replication, restriction, modification, recombination, and repair
Protein Analysis
Peptide Information:
Select
Hydrophobicity Plot:
Select
Prosite Motifs:
1.
ATP/GTP-binding site motif A (P-loop)
Coiled-coil Segments:
Got One!
Secretory Signal Peptides:
None
Genbank Protein Match:
sp|P75177|DP3X_MYCPN
Blast Summary
Full Blast Results
M. gen.
Protein Match:
MG420
Blast Summary
Full Blast Results
M. pneumoniae
Protein Match:
C12_orf681
Blast Summary
Full Blast Results
Notes
Only the N-term half of the Uu protein is homologous to DNA pol III gamma-tau subunits. The total size is the same, but the C-term half is not homologous. There are several KK (AAAAAA nt) sequences that could be used in frameshifting to produce gamma.
Protein Sequence
MSESTLYRKY RPHKFKNVIG QDLIKQALMN ACLNNKITHA YIFSGPRGIG KTSIARIFAS SINCLNPNKG DCCGKCSVCE SILKEQSVDL IELDAASNNG VDQIRIITDN INYLPTFFKY KVYIIDEAHM LSTSAWNALL KTVEEPPQHV IFIFATTEYQ KIPLTIISRC QRYDFKRLNN SELQELIDSI LTKEDIKIDN NAIDKLIQLA DGSGRDCLSI LDQLTTVKKN IDLDLINKTF GLVDNFKVIS LIELIQKNDI LLLREFIYEL YNQGVNLEAF CVQIINVLID YLIYLKTNDI NNLKKVSVDE LKKMLLINFN GNYLLNNFIS LFNNLKKSLN QVFEFEIYLY KIINANNDKL ENKKIELSIN PEENKINNSQ IITTKKIDCF EEINKNTVDF DKLYKTKIFY HKKINNQNDK ESGINQKEEL STELVNDNKL ICNSNDILDN YELAKQAFFN KDIKLSKEMS QKFKDFKNEE TIENSYIDII KQADLVLWCS PNALVLGVEF LGLINRINKV THSFEFIKEF VKKFDSIKLV IAISKKQALN IINIKKQGLK TNIINDVLID DIKMLLKQEE QRKQEQTALL NEIEDEE
Nucleotide Sequence
ATGAGCGAAT CAACATTGTA CCGTAAATAT CGGCCACATA AATTTAAAAA TGTAATAGGT CAAGATTTAA TTAAACAAGC ATTAATGAAT GCTTGTTTAA ACAACAAAAT TACACATGCT TATATTTTTA GTGGACCACG AGGAATTGGA AAAACATCAA TAGCTAGAAT TTTTGCGTCT AGTATTAATT GTTTAAATCC TAATAAAGGT GATTGTTGCG GCAAATGTAG TGTTTGTGAA AGTATTCTCA AAGAACAAAG TGTTGATTTG ATTGAATTAG ATGCTGCTAG TAATAATGGT GTTGATCAAA TACGTATTAT TACTGATAAT ATAAATTATT TACCAACATT TTTTAAGTAT AAAGTCTATA TTATTGATGA AGCACATATG CTATCTACAT CAGCATGAAA TGCTTTATTA AAAACAGTTG AAGAACCACC ACAACACGTT ATTTTTATTT TTGCAACAAC AGAGTACCAA AAAATTCCCT TAACAATTAT TAGTCGTTGC CAACGTTATG ATTTTAAGCG TTTAAATAAC AGTGAATTAC AAGAATTAAT AGACTCTATC CTTACAAAAG AAGATATCAA AATTGATAAT AATGCAATTG ATAAATTAAT TCAATTAGCT GATGGATCTG GGCGTGATTG TTTAAGCATT TTAGATCAAT TAACAACGGT TAAAAAAAAT ATAGATCTTG ATTTAATAAA TAAAACTTTT GGTTTAGTTG ACAACTTTAA AGTAATTTCT TTAATCGAAT TAATTCAAAA AAACGACATT TTATTATTGC GTGAATTTAT TTATGAATTA TACAATCAAG GTGTTAATTT AGAAGCTTTT TGTGTGCAAA TAATAAATGT TTTAATTGAT TATTTAATTT ATTTAAAAAC AAACGATATA AATAATCTTA AAAAAGTATC AGTTGATGAA TTAAAAAAAA TGTTATTAAT TAATTTTAAT GGTAATTATT TGTTAAATAA TTTTATTTCT TTATTTAATA ATTTAAAAAA ATCATTAAAT CAAGTTTTTG AATTTGAAAT TTATTTATAT AAAATAATCA ATGCTAATAA TGATAAATTA GAAAATAAAA AAATAGAATT GTCAATTAAC CCTGAAGAAA ATAAAATTAA TAATTCCCAA ATAATAACGA CAAAAAAAAT CGATTGTTTT GAAGAAATAA ATAAAAATAC TGTTGATTTT GATAAGTTAT ACAAAACAAA AATTTTTTAT CACAAAAAAA TTAACAACCA GAATGATAAA GAATCAGGTA TTAATCAAAA AGAAGAATTA AGTACAGAAT TAGTTAATGA TAATAAATTG ATTTGCAATT CTAATGATAT ATTAGATAAT TATGAACTAG CCAAACAAGC TTTTTTTAAT AAAGACATTA AACTTTCAAA AGAAATGAGT CAAAAATTTA AAGATTTTAA AAATGAAGAA ACCATTGAAA ATAGTTATAT TGATATTATT AAACAAGCTG ATTTAGTACT TTGGTGCTCA CCTAATGCAC TAGTTTTAGG AGTAGAGTTT TTAGGATTAA TTAATCGTAT CAATAAAGTT ACGCATTCAT TTGAATTTAT TAAAGAATTT GTTAAGAAAT TTGATTCTAT CAAGTTAGTT ATTGCTATTA GCAAAAAACA AGCATTAAAT ATTATTAATA TTAAAAAACA AGGTTTAAAA ACTAATATAA TTAATGATGT TTTAATTGAT GATATTAAAA TGTTATTAAA ACAAGAAGAA CAACGAAAAC AAGAACAAAC AGCGTTATTA AATGAAATTG AAGATGAGGA GTAA