Practical Applications of Sequence Analysis
MIC753
Class Schedule
Spring, 2001

Date

Lecture

Topic

Tu, April 1 Introduction; Communications
Th, April 5 2 Using Computers - UNIX
Tu, April 10 3 Running GCG Programs; Text and Graphics
SeqLab: XWindows interface
Th
Tu
April 12
17
4 SeqWeb: Web interface
Sequence Databases and other Data
SeqStore: GCG Oracle-based data storage and access
Th, April 19 5 Sequence Editing; Fragment Assembly
Tu, April 24 Genbank Submission
6 Mapping
Th, April 26 7 Pattern Recognition
Tu, May 1 8 Protein Analysis; Demo: "How to create a simple web page"
Th, May 3 9 Sequence Comparison
Tu, May 8 10 Database Searching
Th, May 10 11 Multiple Sequence Analysis
Tu, May 15 12 Prediction of Functional Motifs; Profiles and Hidden Markov Models
Th, May 17 No Class
Tu, May 22 13 RNA Secondary Structure Prediction
Th, May 24 14 Microarray Analysis
Mo May 28 Due Date Project 1 - Web-based Bioinformatic Solutions
Tu, May 29 No Class
Th May 31 15 Phylogenetic Analysis - Theory and Application
Tu Jun 5 16 Genome Mapping, Sequencing, and Analysis
Mo Jun 11 Due Date Project 2 - Analysis of a gene family
 

Page Last Modified: Saturday, May 12, 2001